Papers
Füchtner S, Alfredsen G, Thygesen LG (2023): Oxalate found in wood cell wall during incipient brown rot degradation. International Biodeterioration & Biodegradation 177: 105531, DOI 10.1016/j.ibiod.2022.105531https://nibio.brage.unit.no/nibio-xmlui/bitstream/handle/11250/3092371/2023_10.1016.j.ibiod.2022.105531_oa.pdf?sequence=1
Bjorn MC, Howe AG (2023). Multifunctional bioretention basins as urban stepping stone habitats for wildflowers and pollinators. URBAN FORESTRY & URBAN GREENING 90. 128133 DOI: 10.1016/j.ufug.2023.128133
https://www.sciencedirect.com/science/article/pii/S1618866723003047?via%3Dihub
Fradera-Soler M, Mravec J, Schulz A, Taboryski R, Jorgensen B, Grace OM (2023). Revisiting an ecophysiological oddity: Hydathode-mediated foliar water uptake in Crassula species from southern Africa PLANT CELL AND ENVIRONMENT DOI: 10.1111/pce.14743
https://onlinelibrary.wiley.com/doi/10.1111/pce.14743
Zhangli Zuo, Milena E Roux, Jonathan R Chevalier, Yasin F Dagdas, Takafumi Yamashino, Søren D Højgaard, Emilie Knight, Lars Østergaard, Eleazar Rodriguez, Morten Petersen (2023). mRNA decay pathway targets ASL9 to mediate plant development. Life Science Alliance Jun 2023, 6 (9) e202302090; DOI: 10.26508/lsa.202302090
https://pubmed.ncbi.nlm.nih.gov/37385753/
Gao C, Gundlach C, Poulsen HF, Bohr T, Schulz A (2023). Tracing the opposing assimilate and nutrient flows in live conifer needles. JOURNAL OF EXPERIMENTAL BOTANY 74 (21); 6677-6691 DOI: 10.1093/jxb/erad334
https://academic.oup.com/jxb/article/74/21/6677/7260303
Ouyang Q, Hansen HCB, Thygesen LG, Tobler DJ: Nitrogen amended graphene catalyses fast reduction of vinyl chloride by nano zerovalent iron. Water Research 244 (2023) 120535, DOI 10.1016/j.watres.2023.120535
https://www.sciencedirect.com/science/article/pii/S0043135423009752?via%3Dihub
Wang C, Holm PE, Andersen ML, Thygesen LG, Nielsen UG, Hansen HCB (2023): Phosphorus doped cyanobacterial biochar catalyzes efficient persulfate oxidation of the antibiotic norfloxacin. Bioresource Technology 388 (2023) 129785, DOI 10.1016/j.biortech.2023.129785
https://www.webofscience.com/wos/woscc/full-record/WOS:001086553400001
Dos Santos CR, Hansen LB, Rojas-Triana M, Johansen AZ, Perez-Moreno M, Regenberg B. Variation of extrachromosomal circular DNA in cancer cell lines. Comput Struct Biotechnol J. 2023 Aug 28;21:4207-4214. doi: 10.1016/j.csbj.2023.08.027. PMID: 37705597; PMCID: PMC10495552.
https://www.webofscience.com/wos/woscc/full-record/WOS:001075722700001
Mathiessen H, Kjeldgaard-Nintemann S, Marola Fernandez Gonzalez C, Henard C, Algreen Reimer J, Vebæk Gelskov S, Haahr Marana M, von Gersdorff Jørgensen L Acute immune responses in zebrafish and evasive behavior of a parasite - who is winning? Front Cell Infect Microbiol. 2023 Jul 5:13:1190931. doi: 10.3389/fcimb.2023.1190931.
https://www.frontiersin.org/articles/10.3389/fcimb.2023.1190931/full
Duque-Estrada P, Hardiman K, Dam AB, Dodge N, Aaslyng MD, Petersen IL (2023). Protein blends and extrusion processing to improve the nutritional quality of plant proteins. FOOD & FUNCTION 14 (16). DOI: 10.1039/d2fo03912e
https://pubs.rsc.org/en/content/articlelanding/2023/fo/d2fo03912e
Füchtner S, Thygesen LG (2023): Subcellular level impact of extractives on brown rot decay of Norway spruce elucidated by confocal Raman microscopy and multivariate data analysis. Wood Science and Technology (2023) 57:827-859. DOI 10.1007/s00226-023-01476-4
https://link.springer.com/article/10.1007/s00226-023-01476-4
Xu DY, Sanden NCH, Hansen LL, Belew ZM, Madsen SR, Meyer L, Jorgensen ME, Hunziker P, Veres D, Crocoll C, Schulz A, Nour-Eldin HH, Halkier BA (2023). Export of defensive glucosinolates is key for their accumulation in seeds. NATURE 617 (7959), DOI: 10.1038/s41586-023-05969-x
https://www.nature.com/articles/s41586-023-05969-x
Kesten C, Garcia-Moreno Á, Amorim-Silva V, Menna A, Castillo AG, Percio F, Armengot L, Ruiz-Lopez N, Jaillais, Sánchez-Rodriguez C, Botella M (2022). Peripheral membrane proteins modulate stress tolerance by safeguarding cellulose synthases. Science Advances 46
DOI: 10.1126/sciadv.abq6971
Stéger A, Hayashi M, Lauritzen EW, Herburger K, Shabala L, Wang C, Bendtsen AK, Nørrevang AF, Madriz-Ordeñana K, Ren S, Trinh MDL, Thordal‑Christensen H, Fuglsang AT, Shabala S, Østerberg JT, Palmgren M (2022). The evolution of plant proton pump regulation via the R domain may have facilitated plant terrestrialization. Communications Biology 5
https://doi.org/10.1038/s42003-022-04291-y
Herburger K, Schoenaers S, Vissenberg K, Mravec J (2022) Shank-localized cell wall growth contributes to Arabidopsis root hair elongation. Nature Plants 8
https://www-nature-com.ep.fjernadgang.kb.dk/articles/s41477-022-01259-y
Yu B, Zheng W, Xing L, Zhu JK, Persson S, Zhao Y (2022). Root twisting drives halotropism via stress-induced microtubule reorientation. Developmental Cell 57
https://doi.org/10.1016/j.devcel.2022.09.012.
Huang Q, Hassager O, Madsen J (2022) Spatial Radical Distribution in Fractured Polymer Glasses and Melts Visualized Using a Profluorescent Nitroxide Probe. Macromolecules 55
https://doi.org/10.1021/acs.macromol.2c01594
Qiu B, Dai X, Li P, Larsen RS, Li R, Price AL, Ding G, Texada MJ, Zhang X, Zuo D, Gao Q, Jiang W, Wen T, Pontieri L, Guo C, Rewitz K, Li Q, Liu W, Boomsma JJ, Zhang G (2022) Canalized gene expression during development mediates caste differentiation in ants. Nature Ecology & Evolution 6
https://doi.org/10.1038/s41559-022-01884-y
Jiang X, Martens HJ, Shekarforoush E, Muhammed MK, Whitehead KA, Arneborg N, Risbo J (2022). Multi-species colloidosomes by surface-modified lactic acid bacteria with enhanced aggregation properties. Journal of Colloid and Interface Science 622
https://doi.org/10.1016/j.jcis.2022.04.136
Ponzecchi A,Thybring EE, Digaitis R, Fredriksson M, Solsona SP, Thygesen LG (2022). Raman micro-spectroscopy of two types of acetylated Norway spruce wood at controlled relative humidity. Front. Plant Sci.,
https://doi.org/10.3389/fpls.2022.986578
Zhang J, Hansen LG, Gudich O, Viehrig K, Lassen LMM, Schrübbers L, Adhikari KB, Rubaszka P, Carrasquer-Alvarez E, Chen L, D'Ambrosio V, Lehka B, Haidar AK, Nallapareddy S, Giannakou K, Laloux M, Arsovska D, Jørgensen MAK, Chan LJG, Kristensen M, Christensen HB, Sudarsan S, Stander EA, Baidoo E, Keasling J (2022) A microbial supply chain for production of the anti-cancer drug vinblastine. Nature 609
https://doi-org.ep.fjernadgang.kb.dk/10.1038/s41586-022-05157-3
Arsic M, Persson DP, Schjoerring JK, Thygesen LG, Lombi E, Doolette CL, Husted S (2022). Foliar-applied manganese and phosphorus in deficient barley: Linking absorption pathways and leaf nutrient status. Physiologia Plantarum 174
https://doi-org.ep.fjernadgang.kb.dk/10.1111/ppl.13761
Wang H, Berg FWJ vander, Zhang W, Czaja TP, Zhang L, Jespersen BM, Lametsch (2022) Differences in physicochemical properties of high-moisture extrudates prepared from soy and pea protein isolates. Food Hydrocolloids 128
https://doi.org/10.1016/j.foodhyd.2022.107540
Liao F, Lilay GH, Castro PH, Azevedo H, Assunção AGL (2022) Regulation of the Zinc Deficiency Response in the Legume Model Medicago truncatula. Front. Plant Sci. 13
https://doi.org/10.3389/fpls.2022.916168
Liu M, Rubiato HM, Nielsen ME. (2922) Mobility of the syntaxin PEN1 in Arabidopsis reflects functional specialization of the conserved SYP12 clade. Plant Signal Behav. 17
https://doi.org/10.1080/15592324.2022.2084278
Laursen, A. K., Rovers, T. A. M., Ipsen, R., Ahrné, L. (2022). Texture and microstructure of heat and acid induced gels from buffalo and cow milk: Effect of thermal treatment and fat content of milk. International Dairy Journal, 129
https://doi.org/10.1016/j.idairyj.2021.105299
Thieffry A, López-Márquez D, Bornholdt J, Malekroudi MG, Bressendorff S, Barghetti A, Sandelin A, Brodersen P (2022) PAMP-triggered genetic reprogramming involves widespread alternative transcription initiation and an immediate transcription factor wave. The Plant Cell 34
https://doi.org/10.1093/plcell/koac108
Rubiato HM, Liu M, O'Connell RJ, Nielsen ME. (2022) Plant SYP12 syntaxins mediate an evolutionarily conserved general immunity to filamentous pathogens. Elife. 11
https://doi.org/10.7554/eLife.73487
Gomez-Osorio LM, Nielsen JU, Martens HJ and Wimmer R (2022) Upgrading the Nutritional Value of PKC Using a Bacillus subtilis Derived Monocomponent β-Mannanase, Molecules 27
https://doi.org/10.3390/molecules27020563
Sanden NC, Schulz A (2022) Identification of new proteins in mature sieve elements. Physiologia Plantarum n/a: e13634
https://doi.org/10.1111/ppl.13634
Rafaeva M, Horton ER, Jensen ARD, Madsen CD, Reuten R, Willacy O, Brochner CB, Jensen TH, Zornhagen KW, Crespo M, Gronseth DS, Nielsen SR, Idorn M, Straten PT, Rohrberg K, Spanggaard I, Hojgaard M, Lassen U, Erler JT, Mayorca-Guiliani AE (2022). Modeling Metastatic Colonization in a Decellularized Organ Scaffold-Based Perfusion Bioreactor- Advanced Healthcare Materials 11
https://onlinelibrary.wiley.com/doi/10.1002/adhm.202100684
Lorrai R, Francocci F, Gully K, Martens HJ, De Lorenzo G, Nawrath C and Ferrari S (2021) Impaired Cuticle Functionality and Robust Resistance to Botrytis cinerea in Arabidopsis thaliana Plants With Altered Homogalacturonan Integrity Are Dependent on the Class III Peroxidase AtPRX71, Frontiers in Plant Science, 12
https://doi.org/10.3389/fpls.2021.696955
López-Marqués RL, Pomorski TG (2021). Imaging of lipid uptake in Arabidopsis seedlings utilizing fluorescent lipids and confocal microscopy. Bio-protocol 11
10.21769/BioProtoc.4228
Juhari NH, Martens HJ, Petersen MA (2021) Changes in Physicochemical Properties and Volatile Compounds of Roselle (Hibiscus sabdariffa L.) Calyx during Different Drying Methods. Molecules 26
https://doi.org/10.3390/molecules26206260.
Sandoval-Ibanez O, Sharma A, Bykowski M, Borras-Gas G, Behrendorff JBYH, Mellor S, Qvortrup K, Verdonk JC, Bock R, Kowalewska L, Pribil M (2021).Curvature thylakoid 1 proteins modulate prolamellar body morphology and promote organized thylakoid biogenesis in Arabidopsis thaliana. PNAS 118
https://www.pnas.org/content/118/42/e2113934118
Han X, Gao C, Liang B, Cui J, Xu Q, Schulz A, Liesche J (2021) Evidence for conifer sucrose transporters' functioning in the light-dependent adjustment of sugar allocation. Tree Physiol
https://www.ncbi.nlm.nih.gov/pubmed/35020944
Kanne JV, Ishikawa M, Bressendorff S, Ansbøl J Hasebe M, Rodriguez E, Petersen M (2021) Overexpression of ATG8/LC3 enhances wound-induced somatic reprogramming in Physcomitrium patens. Autophagy 18
https://doi.org/10.1080/15548627.2021.1975913
Yang YL, Fan P, Lui JX, Xie WJ, Liu N, Niu ZB, Li QQ, Song J, Tian Qj, Bao YU, Wang HG, Feng DS (2021). Thinopyrum intermedium TiAP1 interacts with a chitin deacetylase from Blumeria graminis f. sp. tritici and increases the resistance to Bgt in wheat. Plant Biotechnology J
https://onlinelibrary.wiley.com/doi/10.1111/pbi.13728
Stanchev, L.D.; Rizzo, J.; Peschel, R.; Pazurek, L.A.; Bredegaard, L.; Veit, S.; Laerbusch, S.; Rodrigues, M.L.; López-Marqués, R.L.; Günther Pomorski, T. P-Type ATPase Apt1 of the Fungal Pathogen Cryptococcus neoformans Is a Lipid Flippase of Broad Substrate Specificity. J. Fungi 2021, 7, 843
https://doi.org/10.3390/jof7100843
Pandey C, Grosskinsky DK, Westergaard JC, Jorgensen HJL, Svensgaard J, Christensen S, Schulz A, Roitsch T (2021) Identification of a bio-signature for barley resistance against Pyrenophora teres infection based on physiological, molecular and sensor-based phenotyping. Plant Sci 313: 111072
DOI 10.1016/j.plantsci.2021.111072
Olsen MFL, Pedersen JS, Thomsen ST, Martens HJ, Petersen A and Jensen PE (2021) Outdoor cultivation of a novel isolate of the microalgae Scenedesmus sp. and the evaluation of its potential as a novel protein crop, Physiologia Plantarum, 173
https://doi.org/10.1111/ppl.13532
Eckert D, Martens, HJ, Gu LH, Jensen, AM (2021). CO2 refixation is higher in leaves of woody species with high mesophyll and stomatal resistances to CO2 diffusion. Tree Physiology 41
https://academic.oup.com/treephys/article/41/8/1450/6140907
Khumpirapang N, Jorgensen LG, Mullertz A, Rades T, Okonogi S (2021). Formulation optimization, anesthetic activity, skin permeation, and transportation pathway of Alpinia galanga oil SNEDDS in zebrafish (Danio rerio). Euro. J. Pharmaceutics and BioPharmaceutics
https://www.sciencedirect.com/science/article/pii/S093964112100120X?via%3Dihub
Glazowska S, Mravec, J (2021). An aptamer highly specific to cellulose enables the analysis of the association of cellulose with matrix cell wall polymers in vitro and in muro. Plant J 108
https://onlinelibrary.wiley.com/doi/10.1111/tpj.15442
Ayra-Plasencia J, Ramos-Perez C, Santana-Sosa S, Quevedo O, Medina-Suarez S, Matos-Perdomo E, Zamora-Dorta M, Brown GW, Lisby M, Machin F (2021). Topoisomerase II deficiency leads to a postreplicative structural shift in all Saccharomyces cerevisiae chromosomes. Scientific Reports11
https://www.nature.com/articles/s41598-021-93875-5
Shetty R, Jensen B, Shelton D, Jorgensen K, Pedas P, Jorgensen HJL (2021). Site-specific, silicon-induced structural and molecular defence responses against powdery mildew infection in roses. Pest Management Science 77
https://onlinelibrary.wiley.com/doi/10.1002/ps.6493
Mayorca-Guiliani AE, Rafaeva M, Willacy O, Madsen CD, Reuten R, Erler JT (2021). Decellularization of the Murine Cardiopulmonary Complex. Jove- J. Visualized experiments.
https://www.jove.com/t/61854/decellularization-of-the-murine-cardiopulmonary-complex
Sanden NC, Schulz A (2021) Stationary sieve element proteins. Journal of Plant Physiology 266: 153511
https://doi.org/10.1016/j.jplph.2021.153511
Prendin AL, Carrer M, Pedersen NB, Normand S, Hollesen J, Treier UA, Pividori M, Thygesen LG (2021) Chemical signature of Eurois occulta L. outbreaks in the xylem cell wall of Salix glauca L. in Greenland. Science of the total Environment 764
https://www.sciencedirect.com/science/article/pii/S0048969720381389?via%3Dihub
Liesche J, Vincent C, Han X, Zwieniecki M, Schulz A, Gao C, Bravard R, Marker S, Bohr T (2021) The mechanism of sugar export from long conifer needles. New Phytol 230: 1911-1924
https://www.ncbi.nlm.nih.gov/pubmed/33638181
Xu JC, Sagnelli D, Faisal M, Perzon A, Taresco V, Mais M, Giosafatto CVL, Hebelstrup KH, Ulvskov P, Jorgensen B, Chen L, Howdle SM, Blennow A (2021) Amylose/cellulose nanofiber composites for all-natural, fully biodegradable and flexible bioplastics. Carbohydrate polymers 253
http://dx.doi.org/10.1016/j.carbpol.2020.117277
Sprenger J, Carey J, Schulz A, Drouard F, Lawson CL, von Wachenfeldt C, Linse S, Leggio LL (2021) Guest-protein incorporation into solvent channels of a protein host crystal (hostal). Acta Crystallographica Section D-Biological Crystallography
https://journals.iucr.org/d/services/forthcoming.html
Reuten, R., Zendehroud, S., Nicolau, M. et al. Basement membrane stiffness determines metastases formation. Nat. Mater. (2021).
https://www.nature.com/articles/s41563-020-00894-0#additional-information
Stanchev LD, Marek M, Xian F, Klöhn M, Silvestro D, Dittmar G, López-Marqués RL, Günther Pomorski T. Functional Significance of Conserved Cysteines in the Extracellular Loops of the ATP Binding Cassette Transporter Pdr11p. J Fungi (Basel) (2020) 7: 2
https://www.mdpi.com/2309-608X/7/1/2
Szameitat A, Sharma A, Minutello F, Pinna A, Er-Rafik M, Hansen TH, Persson DP, Andersen B, Husted S (2021). Unravelling the interactions between nanohydroxyapatite and the roots of phosphorus deficient barley plants. Environ. Sci. Nano, 8, 444
https://pubs.rsc.org/en/content/articlelanding/2021/EN/D0EN00974A#!divAbstract
Diaz-delCastillo M, Hansen RB, Appel CK, Nielsen L, Nielsen SN, Karyniotakis K, Dahl LM, Andreasen RB, Heegaard AM. Modulation of rat cancer-induced bone pain is independent of spinal microglia activity. Cancers 2020, 12, 2740.
https://apps.webofknowledge.com/full_record.do?product=WOS&search_mode=GeneralSearch&qid=1&SID=E3Rzzwis7qbUvq7vx9g&page=1&doc=4
Kellard JA, Rorsman NJG, Hill TG, Armour SL, van de Bunt M, Rorsman P, Knudsen JG, Briant LJB. (2020) Reduced somatostatin signalling leads to hypersecretion of glucagon in mice fed a high-fat diet. Molecular Metabolism, 40
https://www.sciencedirect.com/science/article/pii/S2212877820300958
Assunção AGL, Gjetting SK, Hansen M, Fuglsang AT, Schulz A. Plants (Basel). 2020 Oct 3;9(10):1310. doi: 10.3390/plants9101310. PMID: 33022978 Free PMC article.
https://pubmed.ncbi.nlm.nih.gov/33022978/
Nagel M, Qiu B, Brandenborg LE, Larsen RS, Ning D, Boomsma JJ, Zhang G (2020) The gene expression network regulating queen brain remodeling after insemination and its parallel use in ants with reproductive workers. Sci. Adv, 6
https://advances.sciencemag.org/content/6/38/eaaz5772
Gjetting SK, Mahmood K, Shabala L, Kristensen A, Shabala S, Palmgren M, Fuglsang AT. Plant J. 2020 Oct;104(2):433-446. doi: 10.1111/tpj.14935. Epub 2020 Aug 18. PMID: 32713048
https://pubmed.ncbi.nlm.nih.gov/32713048/
Frøsig MM, Costa SR, Liesche J, Østerberg JT, Hanisch S, Nintemann S, Sørensen H, Palmgren M, Pomorski TG, López-Marqués RL. Pseudohyphal growth in Saccharomyces cerevisiae involves protein kinase-regulated lipid flippases. J Cell Sci. 133 (2020): jcs235994
https://journals.biologists.com/jcs/article/133/15/jcs235994/224007/Pseudohyphal-growth-in-Saccharomyces-cerevisiae
Arribas-Hernández L, Simonini S, Hansen MH, Paredes EB, Bressendorff S, Dong Y, Østergaard L, Brodersen P (2020) Recurrent requirement for the m6A-ECT2/ECT3/ECT4 axis in the control of cell proliferation during plant organogenesis. Development 147 (14)
https://journals.biologists.com/dev/article/147/14/dev189134/224382/Recurrent-requirement-for-the-m6A-ECT2-ECT3-ECT4
Okarmus. J., Bogetofte, H., Schmidt, S.I., Ryding, I.M., García-López, S., Ryan, B.J., Martínez-Serrano, A., Hyttel, P. and Meyer, M. (2020): Lysosomal perturbations in human dopaminergic neurons derived from induced pluripotent stem cells with PARK2 mutation. Nature, Scientific Reports 10:10278
https://www.nature.com/articles/s41598-020-67091-6?elqTrackId=4801a32ab0c947f0a7f4826b80b62739
Lächler K, Clauss K, Imhof J, Crocoll C, Schulz A, Halkier BA, Binder S (2020) In Arabidopsis thaliana Substrate Recognition and Tissue- as Well as Plastid Type-Specific Expression Define the Roles of Distinct Small Subunits of Isopropylmalate Isomerase. Frontiers in Plant Science 11
https://www.frontiersin.org/article/10.3389/fpls.2020.00808
Sangregorio A, Muralidhara A, Guigo N, Thygesen LG, Marlari G, Angelici C, Jong ED, Sbirrazzuoli (2020). Humin based resin for wood modification and property improvement. Green Chem 9
https://pubs.rsc.org/en/content/articlelanding/2020/GC/C9GC03620B#!divAbstract
Gao C, Liu X, de Storme N, Jensen KH, Xu Q, Yang C, Liu X, Chen C, Martens HJ, Schulz A, Liesche J (2020) Directionality of plasmodesmata-mediated transport in Arabidopsis leaves supports auxin channeling. Current Biology in press: 1970-1977 e1974
https://www.ncbi.nlm.nih.gov/pubmed/32275878
Tozzi M, Hansen JB, Novak I (2020) Pannexin-1 mediated ATP release in adipocytes is sensitive to glucose and insulin and modulates lipolysis and macrophage migration. Acta Physiol (Oxf) 228: e13360
https://www.ncbi.nlm.nih.gov/pubmed/31400255
Blennow A, Skryhan K, Tanackovic V, Krunic SL, Shaik SS, Andersen MS, Kirk HG, Nielsen KL (2020). Non-GMO potato lines, synthesizing increased amylose and resistant starch, are mainly deficient in isoamylase debranching enzyme. Plant Biotechnology journal 18
http://dx.doi.org/10.1111/pbi.13367
Sørensen DM, Holen HW, Pedersen JT, Martens HJ, Silvestro D, Stanchev LD, Costa SR, Pomorski TG, Lopez-Marques RL, Palmgren M (2019) The P5A ATPase Spf1p is stimulated by phosphatidylinositol 4-phosphate and influences cellular sterol homeostasis. Molecular Biology of the Cell 30: 1069-1084
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6724510/pdf/mbc-30-1069.pdf
Rodriguez E, Chevalier J, Olsen J, Ansbol J, Kapousidou V, Zuo ZL, Svenning S, Loefke C, Koemeda S, Drozdowskyj PS, Jez J, Durnberger G, Kuenzl F, Schutzbier M, Mechtler K, Ebstrup EN, Lolle S, Dagdas Y, Petersen M (2020) Autophagy mediates temporary reprogramming and dedifferentiation in plant somatic cells. EMBO J 39
http://dx.doi.org/10.15252/embj.2019103315
Rodriguez E, Chevalier J, Olsen J, Ansbøl J, Kapousidou V, Zuo Z, Svenning S, Loefke C, Koemeda S, Drozdowskyj SP, Jez J, Durnberger G, Kuenzl F, Schutzbier M, Mechtler K, Ebstrup EN, Lolle S, Dagdas Y, Petersen M (2020) Autophagy mediates temporary reprogramming and dedifferentiation in plant somatic cells. Embo J 39
10.15252/embj.2019103315
Bjørk PK, Rasmussen SA, Gjetting SK, Havshøi NW, Petersen TI, Ipsen JØ, Larsen TO, Fuglsang AT. New Phytol. 2020 May;226(3):770-784. doi: 10.1111/nph.16398. Epub 2020 Feb 3. PMID: 31880817 Free PMC article
https://pubmed.ncbi.nlm.nih.gov/31880817/
Rodriguez E, Chevalier J, Olsen J, Ansbol J, Kapousidou V, Zuo Z, Svenning S, Loefke C, Koemeda S, Drozdowskyj PS, Jez J, Durnberger G, Kuenzl F, Schutzbier M, Mechtler K, Ebstrup EN, Lolle S, Dagdas Y, Petersen M (2020) Autophagy mediates temporary reprogramming and dedifferentiation in plant somatic cells. EMBO J n/a: e103315
https://www.embopress.org/doi/full/10.15252/embj.2019103315
Mayorca-Guiliani AE, Willacy O, Madsen CD, Rafaeva M, Heumüller SE, Bock F, Sengle G, Koch M, Imhof T, Zaucke F, Wagener R, Sasaki T, Erler JT and Reuten R (2019).Decellularization and antibody staining of mouse tissues to map native extracellular matrix structures in 3D. Nature Protocols 14: 3395-3425.
https://doi-org.ep.fjernadgang.kb.dk/10.1038/s41596-019-0225-8
Mayorca-Guiliani AE, Willacy O, Madsen CD, Rafaeva M, Heumuller SE, Bock F, Sengle G, Koch M, Imhof T, Zaucke F, Wagener R, Sasaki T, Erler JT, Reuten R (2019) Decellularization and antibody staining of mouse tissues to map native extracellular matrix structures in 3D. Nature Protocols 14: 3395-3425
https://doi-org.ep.fjernadgang.kb.dk/10.1038/s41596-019-0225-8
Dang TT, Jessen F, Martens HJ, Gringer N, Olsen K, Boknaes N, Orlien V (2019) Proteomic and microscopic approaches in understanding mechanisms of shell-loosening of shrimp (Pandalus borealis) induced by high pressure and protease. Food Chemistry 289: 729-738
https://cab.ku.dk/
Larsen HM, Hansen SK, Mikkelsen JD, Hyttel P, Stummann TC (2019) Alpha7 nicotinic acetylcholine receptors and neural network synaptic transmission in human induced pluripotent stem cell-derived neurons. Stem Cell Res 41: 101642
https://doi.org/10.1016/j.scr.2019.101642
Xu D, Hunziker P, Koroleva O, Blennow A, Crocoll C, Schulz A, Nour-Eldin HH, Halkier BA (2019) GTR-Mediated Radial Import Directs Accumulation of Defensive Glucosinolates to Sulfur-Rich Cells in the Phloem Cap of Arabidopsis Inflorescence Stem. Molecular Plant 12: 1474-1484
https://doi.org/10.1016/j.molp.2019.06.008
Glazowska S, Baldwin L, Mravec J, Bukh C, Fangel JU, Willats WG, and Schjoerring JK (2019)The source of inorganic nitrogen has distinct effects on cell wall composition in Brachypodium distachyon. Journal of Experimental Botany 70: 6461-6473.
10.1093/jxb/erz388
Nyhus, C., Pihl, M., Hyttel, P. and Hall, V.J. (2019): Evidence for nucleolar dysfunction in Alzheimers disease. Rev. Neurosci. DOI: https://doi.org/10.1515/revneuro-2018-0104
https://www.degruyter.com/document/doi/10.1515/revneuro-2018-0104/html
Henríquez-Olguin C, Knudsen JR, Raun SH, Li Z, Dalbram E, Treebak JT, Sylow L, Holmdahl R, Richter EA, Jaimovich E and Jensen TE (2019). Cytosolic ROS production by NADPH oxidase 2regulates muscle glucose uptake during exercise. Nature Communications 10: 4623
https://doi.org/10.1038/s41467-019-12523-9
Hyttel, P., Pessôa, L.V.F., Secher, J.B.-M., Dittlau, K.S., Freude, K., Hall, V.J., Fair, T., Assey, R.J., Laurincik, J., Callesen, H., Greve, T. and Stroebech, L.B. (2019): Oocytes, embryos and pluripotent stem cells from a biomedical perspective. Anim. Reprod. 16:508-523.
https://www.scielo.br/scielo.php?pid=S1984-31432019000300508&script=sci_arttext
Dang TT, Jessen F, Martens HJ, Gringer N, Olsen K, Bøknæs N and Orlien V (2019). Proteomic and microscopic approaches in understanding mechanisms of shell-loosening of shrimp (Pandalus borealis) induced by high pressure and protease. Food Chemistry 289:729-738
https://doi.org/10.1016/j.foodchem.2019.03.059
Hunziker P, Halkier BA and Schulz A (2019). Arabidopsis glucosinolate storage cells transform into phloem fibres at late stages of development. Journal of Experimental Botany, 70:43054317
doi:10.1093/jxb/erz17
Xu D, Hunziker P, Koroleva O, Blennow A, Crocoll C, Schulz A, Nour-Eldin HH, Halkier BA (2019) GTR-Mediated Radial Import Directs Accumulation of Defensive Glucosinolates to Sulfur-Rich Cells in the Phloem Cap of Arabidopsis Inflorescence Stem. Molecular Plant 12: 1474-1484
https://doi.org/10.1016/j.molp.2019.06.008
Henríquez-Olguín C, Renani CB, Arab-Ceschia L, Raun SH, Bhatia A, Li Z, Knudsen JR, Holmdahl R and Jensen TE (2019) Adaptations to high-intensity interval training in skeletal muscle require NADPH oxidase 2. Redox Biology 24:101188
https://doi.org/10.1016/j.redox.2019.101188
Guiu J,Hannezo E, Yui S, Demharter S, Ulyanchenko S, Maimets M, Jørgensen A, Perlman S, Lundvall L, Mamsen LS, Larsen A, Olesen RH, Andersen CY, Thuesen LL, Hare KJ, Pers TH, Khodosevich K, Simons BD and Jensen KB (2019) Tracing the origin of adult intestinal stem cells. Nature volume 570: 107111
https://doi-org.ep.fjernadgang.kb.dk/10.1038/s41586-019-1212-5
Liesche J, Gao C, Binczycki P, Andersen SR, Rademaker H, Schulz A, Martens HJ (2019) Direct Comparison of Leaf Plasmodesma Structure and Function in Relation to Phloem-Loading Type. Plant Physiol 179: 1768-1778
www.plantphysiol.org/cgi/doi/10.1104/pp.18.01353
Otani S, Zhukova M, Koné NA, da Costa RR, Mikaelyan A, Sapountzis P and Poulsen M (2019). Gut microbial compositions mirror caste-specific diets in a major lineage of social insects. Environmental Microbiology Reports 11, 196205
doi:10.1111/1758-2229.12728
Behrendorff JBYH, Sandoval-Ibañez OA, Sharma A, Pribil M (2019) Membrane-Bound Protein Scaffolding in Diverse Hosts Using Thylakoid Protein CURT1A. ACS Synth. Biol. 8, 4: 611-620
https://pubs.acs.org/doi/pdf/10.1021/acssynbio.8b00418
Razza, E.M., Pedersen, H.S., Stroebech, L., Fontes, P.K., Kadarmideen, H.N., Callesen, H., Pihl, M., Nogueira, M.F.G. and Hyttel, P. (2019): Simulated physiological oocyte matura-tion has side effects on bovine oocytes and embryos. J. Assist. Reprod. Genet. Mar;36(3):413-424. doi: 10.1007/s10815-018-1365-4. Epub 2018 Nov 16.
https://link.springer.com/article/10.1007/s10815-018-1365-4
Sørensen DM, Holen HW, Pedersen JT, Martens HJ, Silvestro D, Stanchev LD, Costa SR, Pomorski TG, López-Marqués RL, and Palmgren M (2019) The P5A ATPase Spf1p is stimulated by phosphatidylinositol 4-phosphate and influences cellular sterol homeostasis. Molecular Biology of the Cell 30: 1069-1084
http://www.molbiolcell.org/cgi/doi/10.1091/mbc.E18-06-0365)
Hunziker P, Schulz A (2019) Transmission electron microscopy of the phloem with minimal artefacts. In J Liesche, ed, Phloem: Methods and Protocols. Springer, New York
https://doi-org.ep.fjernadgang.kb.dk/10.1007/978-1-4939-9562-2_2
Lilay GH, Castro PH, Campilho A and Assunção AGL (2019) The Arabidopsis bZIP19 and bZIP23 Activity Requires Zinc Deficiency Insight on Regulation From Complementation Lines. Front. Plant Sci. 9:1955
doi: 10.3389/fpls.2018.01955
Stanfield RC, Schulz A (2019) Super-resolution microscopy of phloem proteins. Phloem: Methods and Protocols
https://link-springer-com.ep.fjernadgang.kb.dk/protocol/10.1007%2F978-1-4939-9562-2_7
Premkumar A, Lindberg S, Lager I, Rasmussen U, Schulz A (2019) Arabidopsis PLDs with C2-domain function distinctively in hypoxia. Physiol Plant 167: 90-110
https://doi-org.ep.fjernadgang.kb.dk/10.1111/ppl.12874
Jørgensen LG, Korbut R, Jeberg S, Kania PW and Buchmann K (2018). Association between adaptive immunity and neutrophil dynamics in zebrafish (Danio rerio) infected by a parasitic ciliate. PLoS ONE 13: e0203297
https://doi.org/10.1371/journal.pone.0203297
Novak I, Solini A (2018) P2X receptor-ion channels in the inflammatory response in adipose tissue and pancreas-potential triggers in onset of type 2 diabetes? Curr Opin Immunol 52: 1-7
https://doi.org/10.1016/j.coi.2018.02.002
Tozzi M, Larsen AT, Lange SC, Giannuzzo A, Andersen MN and Novak I (2018). The P2X7 receptor and pannexin-1 are involved in glucose-induced autocrine regulation in â-cells. Scientific Reports 8:8926
DOI:10.1038/s41598-018-27281-9
Nintemann SJ, Hunziker P, Andersen TG, Schulz A, Burow M, and Halkier BA (2018). Localization of the glucosinolate biosynthetic enzymes reveals distinct spatial patterns for the biosynthesis of indole and aliphatic glucosinolates. Physiologia Plantarum 163: 138-154
https://doi-org.ep.fjernadgang.kb.dk/10.1111/ppl.12672
Gazowska S, Murozuka E, Persson DP, Castro PH and Schjoerring JK (2018). Silicon affects seed development and leaf macrohair formation in Brachypodium distachyon. Physiologia Plantarum 163: 231246
doi:10.1111/ppl.12675
Liberti J, Baer B, Boomsma JJ (2018) Rival seminal fluid induces enhanced sperm motility in a polyandrous ant. BMC Evolutionary Biology 18: 28
https://doi.org/10.1186/s12862-018-1144-y
Carstensen A, Herdean A, Schmidt SB, Sharma A, Spetea C, Pribil M, Husted S (2018) The Impacts of Phosphorus Deficiency on the Photosynthetic Electron Transport Chain. Plant Physiol 177: 271-284
www.plantphysiol.org/cgi/doi/10.1104/pp.17.01624
Han X, Turgeon R, Schulz A, Liesche J (2018)Environmental conditions, not sugar export efficiency, limit the length of conifer leaves. Tree Physiol 39: 312 - 319
https://doi-org.ep.fjernadgang.kb.dk/10.1093/treephys/tpy056
Pribil M, Sandoval-Ibáñez O, Xu W, Sharma A, Labs M, Liu Q, Galgenmüller C, Schneider T, Wessels M, Matsubara S, Jansson S, Wanner G, Leister D (2018) Fine-Tuning of Photosynthesis Requires CURVATURE THYLAKOID1-Mediated Thylakoid Plasticity. Plant Physiology 176: 2351-2364
www.plantphysiol.org/cgi/doi/10.1104/pp.17.00863
Bohr T, Rademaker H, Schulz A (2018) Water motion and sugar translocation in leaves. In A Geitmann, J Gril, eds, Plant Biomechanics. Springer, Berlin, pp 351-374
10.1007/978-3-319-79099-2_16
Pentzold C, Shah SA, Hansen NR, Le Tallec B, Seguin-Orlando A, Debatisse M, Lisby M, Oestergaard VH (2018) FANCD2 binding identifies conserved fragile sites at large transcribed genes in avian cells. Nucleic Acids Res 46: 1280-1294
doi: 10.1093/nar/gkx1260
Quevedo O, Lisby M (2018) Imaging of DNA Ultrafine Bridges in Budding Yeast. Methods Mol Biol 1672: 483-493
https://doi-org.ep.fjernadgang.kb.dk/10.1007/978-1-4939-7306-4_32
Zhukova M, Sapountzis P, Schiøtt M, Boomsma JJ (2017) Diversity and Transmission of Gut Bacteria in Atta and Acromyrmex Leaf-Cutting Ants during Development. Frontiers in Microbiology 8
doi: 10.3389/fmicb.2017.01942
Mayorca-Guiliani AE, Madsen CD,Cox TR, Horton ER, Venning FA, Erler JT (2017). ISDoT: in situ decellularization of tissues for high-resolution imaging and proteomic analysis of native extracellular matrix. Nature medicine 23:890898
https://doi-org.ep.fjernadgang.kb.dk/10.1038/nm.4352
Schulz A (2017) Long-Distance Trafficking: Lost in Transit or Stopped at the Gate? Plant Cell 29: 426-430
www.plantcell.org/cgi/doi/10.1105/tpc.16.00895
Silva S, Altmannova V, Luke-Glaser S, Henriksen P, Gallina I, Yang X, Choudhary C, Luke B, Krejci L, Lisby M (2016) Mte1 interacts with Mph1 and promotes crossover recombination and telomere maintenance. Genes Dev 30: 700-717
http://www.genesdev.org/cgi/doi/10.1101/gad.276204.115.
Zhang Y, Schmid B, Nikolaisen NK, Rasmussen MA, Aldana BI, Agger M, Calloe K, Stummann TC, Larsen HM, Nielsen TT, Huang JR, Xu FP, Liu X, Bolund L, Meyer M, Bak LK, Waagepetersen HS, Luo YL, Nielsen JE, Holst B, Clausen C, Hyttel P, Freude KK, Consortium F (2017) Patient iPSC-Derived Neurons for Disease Modeling of Frontotemporal Dementia with Mutation in CHMP2B. Stem Cell Reports 8: 648-658
http://dx.doi.org/10.1016/j.stemcr.2017.01.012
Hansen SK, Stummann TC, Borland H, Hasholt LF, Tumer Z, Nielsen JE, Rasmussen MA, Nielsen TT, Daechsel JCA, Fog K, Hyttel P (2016) Induced pluripotent stem cell - derived neurons for the study of spinocerebellar ataxia type 3. Stem Cell Research 17: 306-317
https://doi.org/10.1016/j.scr.2016.07.004
CAB publications
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Notify us whenever one of your papers containing imaging data from CAB is published and send the bibliographic details to cab@science.ku.dk. It will then be listed here at this page.
Acknowledgement
If presenting data from our instruments in a scientific publication, remeber to acknowledge CAB, e.g., “Imaging data were collected at the Center for Advanced Bioimaging (CAB) Denmark, University of Copenhagen”.